Sequence Reads

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SourceName of subcloneLaboratory name of subcloneLeft end sequenceAccession numberNumber of nucleotides sequenced (left end)Right end sequenceAccession numberNumber of nucleotides sequenced (right end)Additional sequence readsNumber of nucleotides (additional reads)Number of overlapping nucleotides (additional reads)Total number of nucleotides of subclone sequencedNumber of single variantsNumber of common variantsCommon and abundant variantsFrequency of single variants (%)Number of single variants (within 365 bp overlap)Frequency of single variants (within 365 bp overlap) (%)

A6A6BamHI-1A6_2_4T7AJ509874535T3AJ509938534   1069281390.33130.445
A6BamHI-2A6_2_10T3AJ509875535T7AJ509939534   1069
A6BamHI-3A6_2_12T3AJ509876535T7AJ509940534   1069
A6BamHI-4A6_2_13T3AJ509877535T7AJ509941534X-4A3773421069
A6BamHI-5A6_2_17T3AJ509878535T7AJ509942534X-4A3773421069
A6BamHI-6A6_2_18T3AJ509879535T7AJ509943534X-4A3773421069
A6BamHI-7A6_2_22T3AJ509880535T7AJ509944534X-3A3943591069
A6BamHI-8A6_2_24T7AJ509881477T3AJ509945534X-4A3773421011
Sum:8494

A7A7BamHI-1A7_4T3AJ509882535T7AJ509946534X-3A36929310691313100.13730.09
A7BamHI-2A7_14T3AJ509883535T7AJ509947534   1069
A7BamHI-3A7_17T3AJ509884535T7AJ509948534   1069
A7BamHI-4A7_1T7AJ509885400T3AJ509949534   934
A7BamHI-5A7_5T7AJ509886535T3AJ509950534X-3A269221069
A7BamHI-6A7_6T7AJ509887535T3AJ509951534X-3A231991069
A7BamHI-7A7_8T7AJ509888532T3AJ509952534X-4A3771901066
A7BamHI-8A7_15T3AJ509889535T7AJ509953534X-4A3773421069
A7BamHI-9A7_16T7AJ509890532T3AJ509954534   1066
Sum:9480

A8A8BamHI-1A8_2T7AJ509903535T3AJ509967534X-3A3552851069813120.08310.03
A8BamHI-2A8_3T7AJ509904535T3AJ509968534X-3A4643831069
A8BamHI-3A8_4T7AJ509905535T3AJ509969534   1069
A8BamHI-4A8_6T3AJ509906535T7AJ509970534   1069
A8BamHI-5A8_7T7AJ509907535T3AJ509971534   1069
A8BamHI-6A8_8T3AJ509908535T7AJ509972534   1069
A8BamHI-7A8_10T7AJ509909535T3AJ509973534   1069
A8BamHI-8A8_13T7AJ509910535T3AJ509974534   1069
A8BamHI-9A8_14T7AJ509911532T3AJ509975534   1066
Sum:9618

A10A10BamHI-1A10_2T3AJ509912535T7AJ509976534   1069718130.06530.082
A10BamHI-2A10_3T7AJ509913532T3AJ509977534   1066
A10BamHI-3A10_4T7AJ509914532T3AJ509978534   1066
A10BamHI-4A10_5T7AJ509915532T3AJ509979534   1066
A10BamHI-5A10_11T7AJ509916535T3aAJ509980534T34654651069
A10BamHI-6A10_12T7AJ509917535T3AJ509981534X-3A3281961069
A10BamHI-7A10_8T3AJ509918535T7AJ509982534   1069
A10BamHI-8A10_9T7AJ509919535T3AJ509983534   1069
A10BamHI-9A10_10T3AJ509920535T7AJ509984534   1069
A10BamHI-10A10_1T7AJ509921535T3AJ509985534   1069
Sum:10681

B11B11BamHI-1B11_2_4T7AJ509922535T3aAJ509986534T32982981069212690.19790.247
B11BamHI-2B11_3_1T7AJ509923535T3AJ509987534   1069
B11BamHI-3B11_3_2T7AJ509929535T3AJ509993534   1069
B11BamHI-4B11_3_4T3AJ509924535T7AJ509988534   1069
B11BamHI-5B11_3_5T3AJ509925509T7AJ509989534   1043
B11BamHI-6B11_3_7T3aAJ509930535T7AJ509994534T33443441069
B11BamHI-7B11_3_8T3AJ509931535T7AJ509995534   1069
B11BamHI-8B11_3_10T7AJ509926535T3AJ509990534   1069
B11BamHI-9B11_3_16T3AJ509927535T7AJ509991534   1069
B11BamHI-10B11_3_17T7AJ509928535T3AJ509992534   1069
Sum:10664

B11B11HindIII-7BH_7T7AJ509932337T3AJ509996414   751
B11HindIII-8BH_8T7AJ509933504T3AJ509997565   1069
B11HindIII-9BH_9T7AJ509934504T3AJ509998565   1069
B11HindIII-15BH_15T3AJ509935504T7AJ509999291   795
B11HindIII-17BH_17T7AJ509936504T3AJ510000565   1069
B11HindIII-18BH_18T7AJ509937504T3AJ510001565   1069
Sum:5822

A7A7DraIII-1DraB_1T3AJ510002609T7AJ510017549   1158
A7DraIII-2DraB_3T3AJ510003609T7AJ510018549   1158
A7DraIII-3DraB_4T3AJ510004513T7AJ510019549   1062
A7DraIII-4DraB_6T3AJ510005609T7AJ510020549   1158
A7DraIII-5DraB_8T3AJ510006609T7AJ510021549   1158
A7DraIII-6DraB_12T3AJ510007609T7AJ510022549   1158
A7DraIII-7DraB_14T3AJ510008608T7AJ510023549   1157
A7DraIII-8DraB_15T3AJ510009393T7AJ510024500   893
A7DraIII-9DraB_33T3AJ510010609T7AJ510025549   1158
A7DraIII-10DraB_37T3AJ510011609T7AJ510026549   1158
A7DraIII-11DraB_38T3AJ510012609T7AJ510027549   1158
A7DraIII-12DraB_40T3AJ510013539T7AJ510028549   1088
A7DraIII-13DraB_41T3AJ510014609T7AJ510029549   1158
A7DraIII-14DraB_43T3AJ510015609T7AJ510030549   1158
A7DraIII-15DraB_44T3AJ510016609T7aAJ510031297T7153153906
Sum:16686

A7A7nonDraIII-1A7_oD_4T3AJ509891535T7AJ509955534   1069
A7nonDraIII-2A7_oD_5T3AJ509892535T7AJ509956534   1069
A7nonDraIII-3A7_oD_9T3AJ509893535T7AJ509957534   1069
A7nonDraIII-4A7_oD_10T7AJ509894535T3AJ509958534   1069
A7nonDraIII-5A7_oD_18T7AJ509895535T3AJ509959534   1069
A7nonDraIII-6A7_oD_19T3AJ509896535T7AJ509960534   1069
A7nonDraIII-7A7_oD_23T7AJ509897535T3AJ509961534   1069
A7nonDraIII-8A7_oD_25T7AJ509898535T3AJ509962534   1069
A7nonDraIII-9A7_oD_27T7AJ509899535T3AJ509963534   1069
A7nonDraIII-10A7_oD_28T3AJ509900535T7AJ509964534   1069
A7nonDraIII-11A7_oD_29T3AJ509901535T7AJ509965534   1069
A7nonDraIII-12A7_oD_33T3AJ509902535T7AJ509966534   1069
Sum:12828

Individ 1Individ1-1 SP6AJ509829469T7AJ509829489  469489
Individ1-2 T7AJ509830313SP6AJ509830444  268489
Individ1-3 SP6AJ509831416T7AJ509831489  416489
Individ1-4 T7AJ509832489SP6AJ509832292  292489
Individ1-5 SP6AJ509833472T7AJ509833489  472489
Individ1-6 SP6AJ509834271T7AJ509834489  271489
Individ1-7 SP6AJ509835248T7AJ509835489  248489
Individ1-9 T7AJ509836363SP6AJ509836165  39489
Individ1-10 SP6AJ509837416T7AJ509837489  416489

Individ 2Individ2-7 SP6AJ509838354T7AJ509838400  265489
Individ2-8 T7AJ509839489SP6AJ509839332  332489

Individ 3Individ3-7 T7AJ509840489SP6AJ509840489SP6a489489489

Individ 4Individ4-10 T7AJ509841363SP6AJ509841283  157489
 Sum:6846

Gor 014Gor014-1 T7AJ509815271SP6AJ509815329  78522
Gor014-3 SP6AJ509822396T7AJ509822522  396522
Gor014-4 T7AJ509816304SP6AJ509816450  232522
Gor014-6 T7AJ509817522SP6AJ509817267  267522
Gor014-7 T7AJ509818294SP6AJ509818410  182522
Gor014-8 SP6AJ509819173T7AJ509819501  152522

Gor 165Gor165-2 SP6AJ509823387T7AJ509823293  158522
Gor165-4 T7AJ509820345SP6AJ509820498  321522
Gor165-7 T7AJ509821522SP6AJ509821501  501522
Double strand sequenced:64214698

Total number of nucleotides analyzed:

95817

End sequences
 A6 T7AJ509845482SP6AJ509844360   842
A7 SP6AJ509846461T7AJ509847475   936
A8 T7AJ509849321SP6AJ509848492   813
A10 SP6AJ509850482T7AJ509851133   615
B11 SP6AJ509842339T7AJ509843368   707
B11.60 P86AJ509852228      228

Clones left out
Identical to subclone

A6 A6_2_21T3 535T7 534X-3A3572031069A6BamHI-3
 A6_2_23T3 477T7 534X-4A3783451011A6BamHI-4

A7 A7_7T7 535T3 534X-3A3972141069A7BamHI-1

A8 A8_9T7 535T3 534   1069A8BamHI-2

B11 BH_1T7 453T3 397   850B11HindIII-8
 BH_2T3 504T7 468   972B11HindIII-17
 BH_3T3 504T7 469   973B11HindIII-17
 BH_10T7 288      288left out due to low quality
 BH_11T3 504T7 565   1069B11BamHI-6
 BH_12T7 504T3 517   1021B11BamHI-6
 BH_14T3 504T7 565   1069B11BamHI-6
 BH_16T7 504T3 565   1069B11HindIII-9
 BH_19T7 248T3 468   716B11HindIII-17
 BH_21T3 447T7a 333T7191191780B11HindIII-17
 BH_22T7 252T3 536   788B11HindIII-9
 BH_23T7 504T3 565   1069B11HindIII-17
 BH_24T3 504T7 333   837B11BamHI-6

A7-oD A7_oD_11T7 535T3 534   1069A7nonDraIII-2
 A7_oD_30T3 535T7 534   1069A7BamHI-9
 A7_oD_35T7 535T3 534   1069A7nonDraIII-9

DraB DraB_2T3 487T7 549   1036A7DraIII-1
 DraB_11T3 397T7 549   946A7DraIII-10
 DraB_13T3 411T7 148   559left out due to low quality
 DraB_16T3 374T7 549   923A7DraIII-3
 DraB_35T3 609T7 481   1090A7DraIII-7

Gor 014 Gor014-9T7 522SP6 508  508522Gor014-7

Gor 165 Gor165-1   SP6 326   326unknown sequence
 Gor165-3SP6 207      207unknown sequence
 Gor165-5T7 500SP6 166  144522Gor014-7
 Gor165-8   SP6 105   105diverged alpha
 Gor165-9   SP6 359   359diverged alpha
 Gor165-10T7 522      522diverged alpha

Left out due to potential doublet cloning:

23677 

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Letzte Aktualisierung 22.12.2002